miRBase entry: pny-let-7h

Stem-loop pny-let-7h

Accession

MI0034911

Description

Pundamilia nyererei pny-let-7h precursor miRNA

Sequence

UGAGGUAGUAAGUUGUGUUGUUguuggggaucaggauugugcaccccguuaaggagauaacuauacaacuuacugccuuccu
.(((((((((((((((((.((((((((((..((......))..))))........)))))).)))))))))))))))))...

Structure

--U                 U      --------    au  gg 
   GAGGUAGUAAGUUGUGU GUUguu        gggg  ca  a
   ||||||||||||||||| ||||||        ||||  ||   
   uuccgucauucaacaua caauag        cccc  gu  u
ucc                 u      aggaauug    ac  gu

Annotation confidence Not enough data

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Genome context

JH419252.1: 2846087-2846168 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pny-let-7h

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pny-let-7h

Accession	MIMAT0042932
Description	Pundamilia nyererei pny-let-7h mature miRNA
Sequence	1 - UGAGGUAGUAAGUUGUGUUGUU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381