miRBase entry: pny-mir-24a-2

Stem-loop pny-mir-24a-2


Accession
MI0034914
Description
Pundamilia nyererei pny-mir-24a-2 precursor miRNA


Sequence

ugccugcugugcugauaaucagugugugacgucggcUGGCUCAGUUCAGCAGGAACAG
..(((((((.(((((...(((((...........))))).))))).))))))).....

Structure
---ug       u     uaa     gugu 
     ccugcug gcuga   ucagu    g
     ||||||| |||||   |||||    a
     GGACGAC UGACU   GGUcg    c
GACAA       U     --C     gcug 


Annotation confidence Not enough data
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Genome context
JH419264.1: 1066765-1066822 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pny-mir-24a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pny-miR-24a

Accession MIMAT0042935
Description Pundamilia nyererei pny-miR-24a mature miRNA
Sequence 37 - UGGCUCAGUUCAGCAGGAACAG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381