miRBase entry: pny-mir-489

Stem-loop pny-mir-489


Accession
MI0034919
Description
Pundamilia nyererei pny-mir-489 precursor miRNA


Sequence

uggucguauguaugacgucauuuacuucaaugcuuggagUGACAUCAUAUGUACGGCUGCU
.((((((((((((((.(((....(((((((...)))))))))).))))))))))))))...

Structure
--u              c   auuu       u 
   ggucguauguauga guc    acuucaa  
   |||||||||||||| |||    ||||||| g
   UCGGCAUGUAUACU CAG    Ugagguu  
UCG              A   ----       c 


Annotation confidence Not enough data
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Genome context
JH419235.1: 303076-303136 [-]

Database links

Mature pny-miR-489

Accession MIMAT0042939
Description Pundamilia nyererei pny-miR-489 mature miRNA
Sequence 40 - UGACAUCAUAUGUACGGCUGCU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381