miRBase entry: pny-mir-129-3

Stem-loop pny-mir-129-3


Accession
MI0034921
Description
Pundamilia nyererei pny-mir-129-3 precursor miRNA


Sequence

CUUUUUGCGGUCUGGGCUUGCugucaugugucuauccaggaagcccuuaccccaaaaagcau
(((((((.(((..((((((.(((.............))).))))))..))).)))))))...

Structure
---       C   CU      G   ucaug 
   CUUUUUG GGU  GGGCUU Cug     u
   ||||||| |||  |||||| |||     g
   gaaaaac cca  cccgaa gac     u
uac       c   uu      g   cuauc 


Annotation confidence Not enough data
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Genome context
JH419591.1: 193142-193203 [-]

Database links

Mature pny-miR-129

Accession MIMAT0042938
Description Pundamilia nyererei pny-miR-129 mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381