miRBase entry: pny-mir-7-3

Stem-loop pny-mir-7-3


Accession
MI0034927
Description
Pundamilia nyererei pny-mir-7-3 precursor miRNA


Sequence

UGGAAGACUAGUGAUUUUGUUGUgacgcugaucaaagaacaacaagucccagucugccucu
.((.(((((.(.(((((.(((((...............))))))))))).))))).))...

Structure
--U  A     A U     U     gacgcu 
   GG AGACU G GAUUU GUUGU      g
   || ||||| | ||||| |||||      a
   cc ucuga c cugaa caaca      u
ucu  g     c -     -     agaaac 


Annotation confidence Not enough data
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Genome context
JH419209.1: 2836066-2836126 [+]

Database links

Mature pny-miR-7

Accession MIMAT0042937
Description Pundamilia nyererei pny-miR-7 mature miRNA
Sequence 1 - UGGAAGACUAGUGAUUUUGUUGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381