miRBase entry: pny-let-7b-1

Stem-loop pny-let-7b-1


Accession
MI0034933
Description
Pundamilia nyererei pny-let-7b-1 precursor miRNA


Sequence

UGAGGUAGUAGGUUGUGUGGUUucaggguugugauuuuaccccaucaggagcuaacuauacaaccuacugccuuccc
.(((((((((((((((((((((...((.((.((((........)))).)).)))))))))))))))))))))))...

Structure
--U                     uca  g  g    uuu 
   GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   a
   |||||||||||||||||||||   || || ||||    
   uuccgucauccaacauaucaa   uc ag acua   c
ccc                     ---  g  g    ccc 


Annotation confidence Not enough data
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Genome context
JH419219.1: 2417347-2417423 [+]

Database links

Mature pny-let-7b

Accession MIMAT0042946
Description Pundamilia nyererei pny-let-7b mature miRNA
Sequence 1 - UGAGGUAGUAGGUUGUGUGGUU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381