Stem-loop pny-mir-135c

Accession

MI0034937

Description

Pundamilia nyererei pny-mir-135c precursor miRNA

Sequence

UAUGGCUUUUUAUUCCUAUGUGAugaugaaaaguguucAUGUAGGAACAGAAGCCAUUUU
.(((((((((..(((((((((((..((.....))..))))))))))).)))))))))...

Structure

--U         UA           ug  g 
   AUGGCUUUU  UUCCUAUGUGA  au a
   |||||||||  |||||||||||  || a
   UACCGAAGA  AAGGAUGUAcu  ug a
UUU         -C           ug  a 

Annotation confidence Not enough data

Genome context

JH419283.1: 268500-268559 [+]

Mature pny-miR-135c-5p

• Accession: MIMAT0042950
• Description: Pundamilia nyererei pny-miR-135c-5p mature miRNA
• Sequence: 1 - UAUGGCUUUUUAUUCCUAUGUGA - 23
• Evidence: experimental ; Illumina [1]

Mature pny-miR-135c-3p

• Accession: MIMAT0042951
• Description: Pundamilia nyererei pny-miR-135c-3p mature miRNA
• Sequence: 39 - AUGUAGGAACAGAAGCCAUUUU - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381