Stem-loop pny-mir-218a-1

Accession

MI0034944

Description

Pundamilia nyererei pny-mir-218a-1 precursor miRNA

Sequence

UUGUGCUUGAUCUAACCAUGUGgcugccagguuccuaucguggaacaugguucuuucaagcaccaug
..((((((((...((((((((..((((..(((....))))))).))))))))...))))))))....

Structure

--UU        UCU        Gg    ca   u 
    GUGCUUGA   AACCAUGU  cugc  ggu c
    ||||||||   ||||||||  ||||  |||  
    cacgaacu   uugguaca  ggug  cua c
guac        uuc        -a    --   u 

Annotation confidence Not enough data

Genome context

JH419312.1: 1146800-1146866 [+]

Mature pny-miR-218a

• Accession: MIMAT0042957
• Description: Pundamilia nyererei pny-miR-218a mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381