Stem-loop pny-mir-1-1

Accession

MI0034948

Description

Pundamilia nyererei pny-mir-1-1 precursor miRNA

Sequence

acauacuucuuuauaugcccauaugaacaagagcaacuaUGGAAUGUAAAGAAGUAUGUAU
((((((((((((((((..(((((((........))..))))).))))))))))))))))..

Structure

--                gc     --  aac 
  acauacuucuuuauau  ccaua  ug   a
  ||||||||||||||||  |||||  ||    
  UGUAUGAAGAAAUGUA  GGUau  ac   a
UA                -A     ca  gag 

Annotation confidence Not enough data

Genome context

JH419352.1: 177882-177942 [+]

Mature pny-miR-1

• Accession: MIMAT0042960
• Description: Pundamilia nyererei pny-miR-1 mature miRNA
• Sequence: 40 - UGGAAUGUAAAGAAGUAUGUAU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381