Stem-loop pny-mir-27e-2

Accession

MI0034966

Description

Pundamilia nyererei pny-mir-27e-2 precursor miRNA

Sequence

agaacuuagcucauuagugagcauuacacaaaaaaggaaauugUUCACAGUGGCUAAGUUCAGU
.(((((((((.((((.(((((((.....(......).....))))))))))))))))))))...

Structure

--a         u    a       uuaca aa 
   gaacuuagc cauu gugagca     c  a
   ||||||||| |||| |||||||     |   
   CUUGAAUCG GUGA CACUUgu     g  a
UGA         -    -       uaaag aa 

Annotation confidence Not enough data

Genome context

JH419236.1: 4012827-4012890 [+]

Mature pny-miR-27e

• Accession: MIMAT0042919
• Description: Pundamilia nyererei pny-miR-27e mature miRNA
• Sequence: 44 - UUCACAGUGGCUAAGUUCAGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381