miRBase entry: pny-mir-24b

Stem-loop pny-mir-24b


Accession
MI0034982
Description
Pundamilia nyererei pny-mir-24b precursor miRNA


Sequence

UGCCUACUGAACUGGUAUCAGUguuauaccugaaaacuggcucaguucagcaggaacag
..(((.(((((((((..(((((.............))))).))))))))).))).....

Structure
---UG   A         UA     guuau 
     CCU CUGAACUGG  UCAGU     a
     ||| |||||||||  |||||     c
     gga gacuugacu  gguca     c
gacaa   c         -c     aaagu 


Annotation confidence Not enough data
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Genome context
JH419388.1: 1077952-1078010 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from pny-mir-24b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pny-miR-24b

Accession MIMAT0042978
Description Pundamilia nyererei pny-miR-24b mature miRNA
Sequence 1 - UGCCUACUGAACUGGUAUCAGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381