miRBase entry: pny-mir-147

Stem-loop pny-mir-147


Accession
MI0034998
Description
Pundamilia nyererei pny-mir-147 precursor miRNA


Sequence

acagaaucguuucugcacaaacuaggacgcuuugacacucaGUGUGCGGAAAUGCUUCUGCUC
.(((((.((((((((((((....((............))...)))))))))))).)))))...

Structure
--a     u            aacu  gacgc 
   cagaa cguuucugcaca    ag     u
   ||||| ||||||||||||    ||      
   GUCUU GUAAAGGCGUGU    uc     u
CUC     C            -Gac  acagu 


Annotation confidence Not enough data
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Genome context
JH419389.1: 402519-402581 [-]

Database links

Mature pny-miR-147

Accession MIMAT0042993
Description Pundamilia nyererei pny-miR-147 mature miRNA
Sequence 42 - GUGUGCGGAAAUGCUUCUGCUC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381