miRBase entry: pny-mir-728

Stem-loop pny-mir-728


Accession
MI0035005
Description
Pundamilia nyererei pny-mir-728 precursor miRNA


Sequence

aaauguaguagacuauaaguauacaugaaacucagaaaguAUACUAAGUAUACUACGUUUAC
((((((((((.(((...(((((((..............))))))).))).))))))))))..

Structure
--          g   aua       augaaa 
  aaauguagua acu   aguauac      c
  |||||||||| |||   |||||||       
  UUUGCAUCAU UGA   UCAUAug      u
CA          A   --A       aaagac 


Annotation confidence Not enough data
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Genome context
JH419320.1: 1413517-1413578 [+]

Database links

Mature pny-miR-728

Accession MIMAT0043000
Description Pundamilia nyererei pny-miR-728 mature miRNA
Sequence 41 - AUACUAAGUAUACUACGUUUAC - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381