miRBase entry: pny-mir-722-1

Stem-loop pny-mir-722-1


Accession
MI0035007
Description
Pundamilia nyererei pny-mir-722-1 precursor miRNA


Sequence

uuugaaacguuuuagcuaaaaauguuuccaugcucaagguguuUUUUGCAGAAACGUUUCAGAUU
(((((((((((((.((.(((((((...((........))))))))).)).)))))))))))))..

Structure
--             a  u       uuu  aug 
  uuugaaacguuuu gc aaaaaug   cc   c
  ||||||||||||| || |||||||   ||    
  AGACUUUGCAAAG CG UUUuugu   gg   u
UU             A  U       ---  aac 


Annotation confidence Not enough data
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Genome context
JH419339.1: 1591118-1591182 [-]

Database links

Mature pny-miR-722

Accession MIMAT0042988
Description Pundamilia nyererei pny-miR-722 mature miRNA
Sequence 44 - UUUUGCAGAAACGUUUCAGAUU - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381