miRBase entry: pny-mir-430a-2

Stem-loop pny-mir-430a-2

Accession

MI0035011

Description

Pundamilia nyererei pny-mir-430a-2 precursor miRNA

Sequence

acggcaacaugggcacuuauuugaauucugaauauagUAAGUGCUGAUUGUUGUUGUGU
((((((((((.((((((((((..............)))))))))).).)))))))))..

Structure

--         - g          ugaauu 
  acggcaaca u ggcacuuauu      c
  ||||||||| | ||||||||||       
  UGUUGUUGU A UCGUGAAUga      u
UG         U G          uauaag

Annotation confidence Not enough data

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Genome context

JH421421.1: 897-955 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pny-mir-430a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature pny-miR-430a

Accession	MIMAT0043004
Description	Pundamilia nyererei pny-miR-430a mature miRNA
Sequence	38 - UAAGUGCUGAUUGUUGUUGUGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381