miRBase entry: pny-mir-8160b

Stem-loop pny-mir-8160b


Accession
MI0035027
Description
Pundamilia nyererei pny-mir-8160b precursor miRNA


Sequence

AGAAUAAUGCCAGCAGUCGGCCgugaacucagugucaggccagugcugguguuauugaga
..(((((((((((((.(.((((.(((........)))))))).)))))))))))))....

Structure
--AG             G C    g   acu 
    AAUAAUGCCAGCA U GGCC uga   c
    ||||||||||||| | |||| |||    
    uuauuguggucgu a ccgg acu   a
agag             g -    -   gug 


Annotation confidence Not enough data
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Genome context
JH419226.1: 4894511-4894570 [-]

Database links

Mature pny-miR-8160b

Accession MIMAT0043024
Description Pundamilia nyererei pny-miR-8160b mature miRNA
Sequence 1 - AGAAUAAUGCCAGCAGUCGGCC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381