miRBase entry: pny-mir-10549

Stem-loop pny-mir-10549


Accession
MI0035033
Description
Pundamilia nyererei pny-mir-10549 precursor miRNA


Sequence

cccuguauugcugauuaccuuguggucuuccuguUAGGUAAUCAACAAUCCAGGAC
.((((.((((.(((((((((...((....))....))))))))).)))).))))..

Structure
-c    u    c         -ugu  u 
  ccug auug ugauuaccu    gg c
  |||| |||| |||||||||    ||  
  GGAC UAAC ACUAAUGGA    cc u
CA    C    A         Uugu  u 


Annotation confidence Not enough data
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Genome context
JH419250.1: 2289537-2289592 [+]

Database links

Mature pny-miR-10549

Accession MIMAT0043030
Description Pundamilia nyererei pny-miR-10549 mature miRNA
Sequence 35 - UAGGUAAUCAACAAUCCAGGAC - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381