miRBase entry: oni-mir-454b

Stem-loop oni-mir-454b

Accession

MI0035044

Description

Oreochromis niloticus oni-mir-454b precursor miRNA

Sequence

ccccuaucaguauugccucugcuuucacuagaguuaacagagUAGUGCAAUAUUGCUUAUAGGGUCU
.(((((((((((((((..(((((((.............))))))).)))))))))...))))))...

Structure

--c      ---         cu       cacua 
   cccuau   caguauugc  cugcuuu     g
   ||||||   |||||||||  |||||||     a
   GGGAUA   GUUAUAACG  GAUgaga     g
UCU      UUC         -U       caauu

Annotation confidence Not enough data

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Genome context

CM001455.1: 2080494-2080560 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from oni-mir-454b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-454b

Accession	MIMAT0043039
Description	Oreochromis niloticus oni-miR-454b mature miRNA
Sequence	43 - UAGUGCAAUAUUGCUUAUAGGGUCU - 67
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774