miRBase entry: oni-mir-96-3

Stem-loop oni-mir-96-3

Accession

MI0035050

Description

Oreochromis niloticus oni-mir-96-3 precursor miRNA

Literature search

1 open access papers mention oni-mir-96-3
(3 sentences)

Sequence

UUUGGCACUAGCACAUUUUUGCUuuguuucuccucuuuugagcaaucauguguagugccaauau
.(((((((((.(((((..((((((...............))))))..))))))))))))))...

Structure

--U         G     UU      uguuuc 
   UUGGCACUA CACAU  UUGCUu      u
   ||||||||| |||||  ||||||      c
   aaccgugau gugua  aacgag      c
uau         -     cu      uuuucu

Annotation confidence Not enough data

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Genome context

CM001450.1: 43226224-43226287 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from oni-mir-96-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-96

Accession	MIMAT0042725
Description	Oreochromis niloticus oni-miR-96 mature miRNA
Sequence	1 - UUUGGCACUAGCACAUUUUUGCU - 23
Evidence	experimental Illumina [1-2]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774