miRBase entry: oni-mir-26c

Stem-loop oni-mir-26c

Accession

MI0035071

Description

Oreochromis niloticus oni-mir-26c precursor miRNA

Literature search

3 open access papers mention oni-mir-26c
(5 sentences)

Sequence

GCAAGUAAUCACGAAUAGGCCauccaggauacacacagccuauccuggauuacuugaacu
.(((((((((..(.((((((.................)))))).)..)))))))))....

Structure

---G         AC A      Cauccag 
    CAAGUAAUC  G AUAGGC       g
    |||||||||  | ||||||       a
    guucauuag  c uauccg       u
ucaa         gu c      acacaca

Annotation confidence Not enough data

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Genome context

CM001461.1: 4025929-4025988 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-26c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-26c

Accession	MIMAT0043064
Description	Oreochromis niloticus oni-miR-26c mature miRNA
Sequence	1 - GCAAGUAAUCACGAAUAGGCC - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774