miRBase entry: oni-mir-10598

Stem-loop oni-mir-10598

Accession

MI0035085

Description

Oreochromis niloticus oni-mir-10598 precursor miRNA

Sequence

caggaugaacugugaguggcauuuuugucaggacaaaUGGACCGAACAAUGCAUCCUGCA
(((((((...(((...(((....(((((....)))))....))).)))...)))))))..

Structure

--       aac   gag   cauu     c 
  caggaug   ugu   ugg    uuugu a
  |||||||   |||   |||    |||||  
  GUCCUAC   ACA   GCC    aaaca g
AC       GUA   --A   AGGU     g

Annotation confidence Not enough data

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Genome context

CM001457.1: 29360432-29360491 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10598

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10598

Accession	MIMAT0043074
Description	Oreochromis niloticus oni-miR-10598 mature miRNA
Sequence	38 - UGGACCGAACAAUGCAUCCUGCA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774