miRBase entry: oni-mir-10599

Stem-loop oni-mir-10599

Accession

MI0035087

Description

Oreochromis niloticus oni-mir-10599 precursor miRNA

Sequence

AGUUGGGACUGUCAUGGAGGGCcgcaaccuuauuagaaagggccuccacaacagucccagguc
..((((((((((..((((((.((................)).))))))..))))))))))...

Structure

-AG          CA      G  gcaaccu 
   UUGGGACUGU  UGGAGG Cc       u
   ||||||||||  |||||| ||        
   gacccugaca  accucc gg       a
cug          ac      g  aaagauu

Annotation confidence Not enough data

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Genome context

CM001448.1: 19238514-19238576 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10599

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10599

Accession	MIMAT0043075
Description	Oreochromis niloticus oni-miR-10599 mature miRNA
Sequence	1 - AGUUGGGACUGUCAUGGAGGGC - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774