miRBase entry: oni-mir-199c

Stem-loop oni-mir-199c

Accession

MI0035091

Description

Oreochromis niloticus oni-mir-199c precursor miRNA

Sequence

AACCAAUGUGCAGACUACUGUUcagcugcagccugaugaacagguagucugaacacugggcag
..(((.(((.((((((((((((((.(........).)))))).)))))))).))).)))....

Structure

--AA   A   G        -      g ugc 
    CCA UGU CAGACUAC UGUUca c   a
    ||| ||| |||||||| |||||| |    
    ggu aca gucugaug acaagu g   g
gacg   c   a        g      a ucc

Annotation confidence Not enough data

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Genome context

CM001447.1: 16325881-16325943 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-199c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-199c

Accession	MIMAT0043079
Description	Oreochromis niloticus oni-miR-199c mature miRNA
Sequence	1 - AACCAAUGUGCAGACUACUGUU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774