miRBase entry: oni-mir-10616a

Stem-loop oni-mir-10616a


Accession
MI0035110
Description
Oreochromis niloticus oni-mir-10616a precursor miRNA


Sequence

cagccagucucuaaagcaaaaaggcaaaccuauauauuauccUUUGUUUUAGAGACUGGCUGUU
(((((((((((((((((((..(((..((........))..))))))))))))))))))))))..

Structure
--                   aa   ca  ccu 
  cagccagucucuaaagcaa  agg  aa   a
  |||||||||||||||||||  |||  ||    
  GUCGGUCAGAGAUUUUGUU  Ucc  uu   u
UU                   --   ua  aua 


Annotation confidence Not enough data
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Genome context
CM001455.1: 24779057-24779120 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-10616a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-10616a

Accession MIMAT0043097
Description Oreochromis niloticus oni-miR-10616a mature miRNA
Sequence 43 - UUUGUUUUAGAGACUGGCUGUU - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774