miRBase entry: oni-mir-9b-5

Stem-loop oni-mir-9b-5

Accession

MI0035137

Description

Oreochromis niloticus oni-mir-9b-5 precursor miRNA

Sequence

UUUCGGUUAUCUAGCUUUAUGAugcaugauuaucacucauacagcuagauaaccaaaga
....((((((((((((.(((((((.((....)))).))))).)))))))))))).....

Structure

-UUUC            U     -  c  g 
     GGUUAUCUAGCU UAUGA ug au a
     |||||||||||| ||||| || ||  
     ccaauagaucga auacu ac ua u
agaaa            c     c  -  u

Annotation confidence Not enough data

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Genome context

CM001444.1: 13557586-13557644 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-9b-5

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-9b

Accession	MIMAT0043085
Description	Oreochromis niloticus oni-miR-9b mature miRNA
Sequence	1 - UUUCGGUUAUCUAGCUUUAUGA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774