Stem-loop oni-mir-10643

Accession

MI0035154

Description

Oreochromis niloticus oni-mir-10643 precursor miRNA

Sequence

AGUGGCUUUGGUCAGCUUUGGuaaaugucaugcaccugagcaacaaaaggccucuua
((.((((((.....((((.(((...........))).)))).....)))))).))..

Structure

--  U      GGUCA    U   aaau 
  AG GGCUUU     GCUU GGu    g
  || ||||||     |||| |||    u
  uc ccggaa     cgag cca    c
au  u      aacaa    u   cgua 

Annotation confidence Not enough data

Genome context

GL831444.1: 633644-633700 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from oni-mir-10643

Mature oni-miR-10643

• Accession: MIMAT0043132
• Description: Oreochromis niloticus oni-miR-10643 mature miRNA
• Sequence: 1 - AGUGGCUUUGGUCAGCUUUGG - 21
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774