miRBase entry: oni-mir-10686-1

Stem-loop oni-mir-10686-1

Accession

MI0035208

Description

Oreochromis niloticus oni-mir-10686-1 precursor miRNA

Sequence

auugcgcagaccuguccgagagggauauagaacccucUCGGACAGGUCUGCGCAAUGCA
((((((((((((((((((((((((........))))))))))))))))))))))))...

Structure

---                        aua 
   auugcgcagaccuguccgagaggg   u
   ||||||||||||||||||||||||    
   UAACGCGUCUGGACAGGCUcuccc   a
ACG                        aag

Annotation confidence Not enough data

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Genome context

CM001464.1: 14763955-14764013 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10686-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10686

Accession	MIMAT0043185
Description	Oreochromis niloticus oni-miR-10686 mature miRNA
Sequence	38 - UCGGACAGGUCUGCGCAAUGCA - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774