miRBase entry: oni-mir-34b

Stem-loop oni-mir-34b

Accession

MI0035212

Description

Oreochromis niloticus oni-mir-34b precursor miRNA

Sequence

CUGGUAGUGUAGUUAGUGAUUaguguguaagaacaaucagcuaacgacacugccuaua
..((((((((.((((((((((.((........))))))).))))).))))))))....

Structure

--CU        A     -     a  gug 
    GGUAGUGU GUUAG UGAUU gu   u
    |||||||| ||||| ||||| ||    
    ccgucaca caauc acuaa ca   a
auau        g     g     -  aga

Annotation confidence Not enough data

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Genome context

CM001453.1: 13229095-13229152 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-34b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-34b

Accession	MIMAT0043188
Description	Oreochromis niloticus oni-miR-34b mature miRNA
Sequence	1 - CUGGUAGUGUAGUUAGUGAUU - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774