miRBase entry: oni-mir-10621b

Stem-loop oni-mir-10621b

Accession

MI0035219

Description

Oreochromis niloticus oni-mir-10621b precursor miRNA

Sequence

cagccacugcagaggguauacuggcaccuuaaaggccacagUACACCCACUGUAAUGGUCGCU
..((((.(((((.((((.(((((...(((...)))...))))).)))).))))).))))....

Structure

--ca    c     a    a     gca   u 
    gcca ugcag gggu uacug   ccu  
    |||| ||||| |||| |||||   ||| a
    UGGU AUGUC CCCA AUgac   gga  
UCGC    A     A    C     acc   a

Annotation confidence Not enough data

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Genome context

GL831436.1: 190848-190910 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10621b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10621b

Accession	MIMAT0043194
Description	Oreochromis niloticus oni-miR-10621b mature miRNA
Sequence	42 - UACACCCACUGUAAUGGUCGCU - 63
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774