miRBase entry: oni-mir-144b

Stem-loop oni-mir-144b

Accession

MI0035252

Description

Oreochromis niloticus oni-mir-144b precursor miRNA

Literature search

1 open access papers mention oni-mir-144b
(7 sentences)

Sequence

aguacaucaucuauacuguagugucucuuuaauaaacUUACAGUAUAAGAUGAUAUCCUG
.....(((((((((((((((((.............)).)))))))).)))))))......

Structure

-aguac       -        -  gucuc 
      aucaucu auacugua gu     u
      ||||||| |||||||| ||     u
      UAGUAGA UAUGACAU ca     u
GUCCUA       A        U  aauaa

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

GL831331.1: 655262-655321 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from oni-mir-144b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-144b

Accession	MIMAT0043226
Description	Oreochromis niloticus oni-miR-144b mature miRNA
Sequence	38 - UUACAGUAUAAGAUGAUAUCCUG - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774