miRBase entry: oni-mir-132d

Stem-loop oni-mir-132d

Accession

MI0035279

Description

Oreochromis niloticus oni-mir-132d precursor miRNA

Literature search

1 open access papers mention oni-mir-132d
(11 sentences)

Sequence

ACCAUGGCUGUAGACUGUUACCauggugcuguugcuagaguaacaaucuaaagccacgguc
(((.(((((.((((.((((((..((((......))))..)))))).)))).))))).))).

Structure

-   A     G    C      Ca    gc 
 ACC UGGCU UAGA UGUUAC  uggu  u
 ||| ||||| |||| ||||||  ||||   
 ugg accga aucu acaaug  aucg  g
c   c     a    a      ag    uu

Annotation confidence Not enough data

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Genome context

GL831384.1: 415083-415143 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from oni-mir-132d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-132d

Accession	MIMAT0043253
Description	Oreochromis niloticus oni-miR-132d mature miRNA
Sequence	1 - ACCAUGGCUGUAGACUGUUACC - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774