miRBase entry: oni-mir-10780

Stem-loop oni-mir-10780


Accession
MI0035316
Description
Oreochromis niloticus oni-mir-10780 precursor miRNA


Sequence

agagcagcuuugcaugagucaguuuaaaaugaaccgugACUCAUUCUGAGCUGUGAAGU
...(((((((.(.(((((((((((((...)))))..)))))))).).))))))).....

Structure
--aga       u c        --     a 
     gcagcuu g augaguca  guuua  
     ||||||| | ||||||||  ||||| a
     UGUCGAG C UACUCAgu  caagu  
UGAAG       U U        gc     a 


Annotation confidence Not enough data
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Genome context
CM001449.1: 34631916-34631974 [+]

Database links

Mature oni-miR-10780

Accession MIMAT0043289
Description Oreochromis niloticus oni-miR-10780 mature miRNA
Sequence 39 - ACUCAUUCUGAGCUGUGAAGU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774