miRBase entry: oni-mir-10813-1

Stem-loop oni-mir-10813-1


Accession
MI0035350
Description
Oreochromis niloticus oni-mir-10813-1 precursor miRNA


Sequence

ACUGACACUCGGAUUAAGAUAagauggccuuuauuaucuuaucuuaauccgagugucagucuga
(((((((((((((((((((((((((((......)))))))))))))))))))))))))))....

Structure
----                           cc 
    ACUGACACUCGGAUUAAGAUAagaugg  u
    |||||||||||||||||||||||||||   
    ugacugugagccuaauucuauucuauu  u
aguc                           au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
CM001457.1: 28429777-28429840 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-10813-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-10813

Accession MIMAT0043323
Description Oreochromis niloticus oni-miR-10813 mature miRNA
Sequence 1 - ACUGACACUCGGAUUAAGAUA - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774