miRBase entry: oni-mir-10819

Stem-loop oni-mir-10819


Accession
MI0035358
Description
Oreochromis niloticus oni-mir-10819 precursor miRNA


Sequence

UCCUCCUAUUGGUCAAACUGCGuccucacaauuugcaguugaaccaacgggagga
(((((((.(((((..(((((((...........)))))))..))))).)))))))

Structure
       A     CA       uccu 
UCCUCCU UUGGU  AACUGCG    c
||||||| |||||  |||||||    a
aggaggg aacca  uugacgu    c
       c     ag       uuaa 


Annotation confidence Not enough data
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Genome context
CM001449.1: 4660261-4660315 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-10819
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-10819

Accession MIMAT0043330
Description Oreochromis niloticus oni-miR-10819 mature miRNA
Sequence 1 - UCCUCCUAUUGGUCAAACUGCG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774