miRBase entry: oni-mir-10822

Stem-loop oni-mir-10822


Accession
MI0035361
Description
Oreochromis niloticus oni-mir-10822 precursor miRNA


Sequence

cugcgcagccuguguguucaccaauccucuggagguggUGAAAACACGUCUGCAGCUACA
..((((((..(((((.(((((((.(((...)))..))))))).))))).)))).))....

Structure
--cu  -    cc     g       -a   u 
    gc gcag  ugugu uucacca  ucc  
    || ||||  ||||| |||||||  ||| c
    CG CGUC  GCACA AAGUggu  agg  
ACAU  A    -U     A       gg   u 


Annotation confidence Not enough data
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Genome context
CM001448.1: 19513861-19513920 [+]

Database links

Mature oni-miR-10822

Accession MIMAT0043333
Description Oreochromis niloticus oni-miR-10822 mature miRNA
Sequence 39 - UGAAAACACGUCUGCAGCUACA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774