miRBase entry: oni-mir-124b-2

Stem-loop oni-mir-124b-2


Accession
MI0035367
Description
Oreochromis niloticus oni-mir-124b-2 precursor miRNA


Sequence

cauucaccgcgugccuuaauuguauggacauuuaaaUCAAGGUCCGCUGUGAACACG
..(((((.(((.(((((.(((.............))).))))).))).)))))....

Structure
--ca     c   u     a   guaug 
    uucac gcg gccuu auu     g
    ||||| ||| ||||| |||     a
    AAGUG CGC UGGAA Uaa     c
GCAC     U   C     C   auuua 


Annotation confidence Not enough data
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Genome context
CM001458.1: 13597516-13597572 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-124b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-124b

Accession MIMAT0043338
Description Oreochromis niloticus oni-miR-124b mature miRNA
Sequence 37 - UCAAGGUCCGCUGUGAACACG - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774