miRBase entry: oni-mir-10838

Stem-loop oni-mir-10838


Accession
MI0035381
Description
Oreochromis niloticus oni-mir-10838 precursor miRNA


Sequence

CACACAUGUGCCAGCACAGGACCaccagugugucuggaacuggccuucugcugucccauguguggg
((((((((.(.(((((.(((.(((((((.....))))...))))))..))))).).))))))))..

Structure
--        U C     -C   A   ---    u 
  CACACAUG G CAGCA  AGG CCa   ccag g
  |||||||| | |||||  ||| |||   |||| u
  guguguac c gucgu  ucc ggu   gguc g
gg        c u     cu   -   caa    u 


Annotation confidence Not enough data
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Genome context
CM001460.1: 5183654-5183719 [-]

Database links

Mature oni-miR-10838

Accession MIMAT0043352
Description Oreochromis niloticus oni-miR-10838 mature miRNA
Sequence 1 - CACACAUGUGCCAGCACAGGACC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774