miRBase entry: oni-mir-10616b

Stem-loop oni-mir-10616b

Accession

MI0035392

Description

Oreochromis niloticus oni-mir-10616b precursor miRNA

Sequence

aacagccagucucuaaaacaaaggauaauauauagguuugccuuuuUGCUUUAGAGACUGGCUGUUCU
(((((((((((((((((.((((((..(((......)))..)))..))).)))))))))))))))))..

Structure

--                 a   --   au   au 
  aacagccagucucuaaa caa  agg  aau  a
  ||||||||||||||||| |||  |||  |||   
  UUGUCGGUCAGAGAUUU GUu  ucc  uug  u
UC                 C   uu   gu   ga

Annotation confidence Not enough data

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Genome context

CM001455.1: 24779057-24779124 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10616b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10616b

Accession	MIMAT0043360
Description	Oreochromis niloticus oni-miR-10616b mature miRNA
Sequence	47 - UGCUUUAGAGACUGGCUGUUCU - 68
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774