miRBase entry: oni-mir-10851-2

Stem-loop oni-mir-10851-2


Accession
MI0035411
Description
Oreochromis niloticus oni-mir-10851-2 precursor miRNA


Sequence

aaagaccuccacagggucuggauccugcaucaggACUCGGAUCUGGAGGUUUUUCU
(((((((((((...(((((((.(((((...))))).))))))))))))))))))..

Structure
--           cag       a     c 
  aaagaccucca   ggucugg uccug  
  |||||||||||   ||||||| ||||| a
  UUUUUGGAGGU   CUAGGCU Aggac  
UC           ---       C     u 


Annotation confidence Not enough data
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Genome context
CM001450.1: 34400398-34400453 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from oni-mir-10851-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-10851

Accession MIMAT0043372
Description Oreochromis niloticus oni-miR-10851 mature miRNA
Sequence 35 - ACUCGGAUCUGGAGGUUUUUCU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774