miRBase entry: oni-mir-199b-1

Stem-loop oni-mir-199b-1

Accession

MI0035417

Description

Oreochromis niloticus oni-mir-199b-1 precursor miRNA

Sequence

UAACCAAUGUGCAGACUACUGUacaaccacuacuuccugaacagguagucugaacacugggcag
...(((.(((.(((((((((((.((............)).))).)))))))).))).)))....

Structure

-UAA   A   G        -   a  accac 
    CCA UGU CAGACUAC UGU ca     u
    ||| ||| |||||||| ||| ||      
    ggu aca gucugaug aca gu     a
gacg   c   a        g   a  ccuuc

Annotation confidence Not enough data

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Genome context

CM001450.1: 27355400-27355463 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-199b-1

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-199b

Accession	MIMAT0043142
Description	Oreochromis niloticus oni-miR-199b mature miRNA
Sequence	1 - UAACCAAUGUGCAGACUACUGU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774