Stem-loop oni-mir-10871

Accession

MI0035430

Description

Oreochromis niloticus oni-mir-10871 precursor miRNA

Sequence

AAGGGCCUGUAUUUGUAUAGCGCuuuacuuaguuccuaaggaccccaaagcgcuuuacauuauauacagucaucca
..(((.((((((.((((.((((((((.....((((....))))...)))))))).))))....))))))...))).

Structure

AA   --C      ---U    U        acuua    c 
  GGG   CUGUAU    UGUA AGCGCuuu     guuc u
  |||   ||||||    |||| ||||||||     ||||  
  ccu   gacaua    acau ucgcgaaa     cagg a
-a   acu      uauu    u        --ccc    a 

Annotation confidence Not enough data

Genome context

CM001455.1: 31816460-31816535 [-]

Mature oni-miR-10871

• Accession: MIMAT0043393
• Description: Oreochromis niloticus oni-miR-10871 mature miRNA
• Sequence: 1 - AAGGGCCUGUAUUUGUAUAGCGC - 23
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25199625
   Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
   Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
   BMC Genomics (2014) 15:774