miRBase entry: oni-mir-10888

Stem-loop oni-mir-10888


Accession
MI0035458
Description
Oreochromis niloticus oni-mir-10888 precursor miRNA


Sequence

ugccguugggcugacggugacaggacaguguuggagcuuugucUUGCAACGUUAACCUGAGGCACC
((((.(((((.(((((.((.((((((((.((....)).)))))))))).))))).)))))))))..

Structure
--    g     c     g  a        u  u 
  ugcc uuggg ugacg ug caggacag gu g
  |||| ||||| ||||| || |||||||| ||  
  ACGG AGUCC AUUGC AC GUUcuguu cg g
CC    -     A     A  -        u  a 


Annotation confidence Not enough data
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Genome context
CM001450.1: 50026813-50026878 [+]

Database links

Mature oni-miR-10888

Accession MIMAT0043418
Description Oreochromis niloticus oni-miR-10888 mature miRNA
Sequence 44 - UUGCAACGUUAACCUGAGGCACC - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774