miRBase entry: oni-mir-181c-2

Stem-loop oni-mir-181c-2

Accession

MI0035498

Description

Oreochromis niloticus oni-mir-181c-2 precursor miRNA

Literature search

2 open access papers mention oni-mir-181c-2
(3 sentences)

Sequence

AACAUUCAACGCUGUCGGUGAGuuugugacucagagaaaaccaucgaguguugaguguacc
.(((((((((((..((((((.((((............)))))))))))))))))))))...

Structure

--A           UG      A    gugac 
   ACAUUCAACGC  UCGGUG Guuu     u
   |||||||||||  |||||| ||||      
   ugugaguugug  agcuac caaa     c
cca           --      -    agaga

Annotation confidence Not enough data

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Genome context

CM001447.1: 13320141-13320201 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-181c-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-181c

Accession	MIMAT0043428
Description	Oreochromis niloticus oni-miR-181c mature miRNA
Sequence	1 - AACAUUCAACGCUGUCGGUGAG - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774