miRBase entry: oni-mir-199b-3

Stem-loop oni-mir-199b-3


Accession
MI0035507
Description
Oreochromis niloticus oni-mir-199b-3 precursor miRNA


Sequence

UAACCAAUGUGCAGACUACUGUacaccaguaugacaaugaacagguagucugaacacuggg
...(((.(((.(((((((((((((....))))...........))))))))).))).))).

Structure
UAA   A   G         -----------    a 
   CCA UGU CAGACUACU           GUac c
   ||| ||| |||||||||           ||||  
   ggu aca gucugaugg           uaug c
--g   c   a         acaaguaacag    a 


Annotation confidence Not enough data
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Genome context
GL831264.1: 905752-905812 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from oni-mir-199b-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-199b

Accession MIMAT0043142
Description Oreochromis niloticus oni-miR-199b mature miRNA
Sequence 1 - UAACCAAUGUGCAGACUACUGU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774