miRBase entry: oni-mir-301c

Stem-loop oni-mir-301c


Accession
MI0035513
Description
Oreochromis niloticus oni-mir-301c precursor miRNA


Sequence

uaugacaauacuauugcacugcuagaauggaugguacagUAGUGCAACAUUGUCAAAGCAG
..(((((((....((((((((((.(.((.....)).))))))))))).)))))))......

Structure
----ua       acua          a a  g 
      ugacaau    uugcacugcu g au g
      |||||||    |||||||||| | || a
      ACUGUUA    AACGUGAUga c ug u
GACGAA       ---C          - a  g 


Annotation confidence Not enough data
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Genome context
CM001450.1: 19692982-19693042 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from oni-mir-301c
Name Accession Chromosome Start End Strand Confidence




Database links

Mature oni-miR-301c

Accession MIMAT0043467
Description Oreochromis niloticus oni-miR-301c mature miRNA
Sequence 40 - UAGUGCAACAUUGUCAAAGCAG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774