miRBase entry: oni-mir-10933

Stem-loop oni-mir-10933

Accession

MI0035522

Description

Oreochromis niloticus oni-mir-10933 precursor miRNA

Sequence

ACAGUGGCUUUAGAGACCGGAGcuccauauguuucucuccggugccuugagcaccguguac
(((..(((((.((..(((((((..............)))))))..)).)))).)..)))..

Structure

--   GU -    U  AG       cuccau 
  ACA  G GCUU AG  ACCGGAG      a
  |||  | |||| ||  |||||||       
  ugu  c cgag uc  uggccuc      u
ca   gc a    u  cg       ucuuug

Annotation confidence Not enough data

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Genome context

CM001451.1: 9611340-9611400 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10933

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10933

Accession	MIMAT0043476
Description	Oreochromis niloticus oni-miR-10933 mature miRNA
Sequence	1 - ACAGUGGCUUUAGAGACCGGAG - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774