miRBase entry: oni-mir-10935

Stem-loop oni-mir-10935

Accession

MI0035524

Description

Oreochromis niloticus oni-mir-10935 precursor miRNA

Sequence

ACUCGGCUUCGUCUCCAACGCcucuucucccuucuucucagggaguggagagauaggccugaagucc
....(((((((........((((.((((((((((((...)))))).))))))..)))).))))))).

Structure

ACUC       UCUCCAAC    -c      -      c 
    GGCUUCG        GCcu  uucucc cuucuu  
    |||||||        ||||  |||||| |||||| u
    cugaagu        cgga  gagagg gaggga  
---c       -------c    ua      u      c

Annotation confidence Not enough data

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Genome context

CM001449.1: 7161066-7161132 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-10935

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-10935

Accession	MIMAT0043478
Description	Oreochromis niloticus oni-miR-10935 mature miRNA
Sequence	1 - ACUCGGCUUCGUCUCCAACGC - 21
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774