miRBase entry: oni-mir-23d

Stem-loop oni-mir-23d

Accession

MI0035526

Description

Oreochromis niloticus oni-mir-23d precursor miRNA

Sequence

aaaucccuggcaaugugauucaguccucuaguuuaaaaaAAAUCACUCUGCCAGGAAUUCC
.....(((((((..((((((....................))))))..)))))))......

Structure

-aaauc       au      caguccucu 
      ccuggca  gugauu         a
      |||||||  ||||||          
      GGACCGU  CACUAA         g
CCUUAA       CU      Aaaaaauuu

Annotation confidence Not enough data

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Genome context

CM001447.1: 982334-982394 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from oni-mir-23d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-23d

Accession	MIMAT0043480
Description	Oreochromis niloticus oni-miR-23d mature miRNA
Sequence	40 - AAAUCACUCUGCCAGGAAUUCC - 61
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774