miRBase entry: oni-mir-10941

Stem-loop oni-mir-10941


Accession
MI0035533
Description
Oreochromis niloticus oni-mir-10941 precursor miRNA


Sequence

agagaaaaggugaggggggaaguguuuagagccgaucugaaucgacuuuaugucacgcuugcUCACACAAAUCACUCGUCUCACU
.((((...(((((..(((.((((((.(((((.((((....)))).)))))....)))))).))).......)))))..))))...

Structure
--a    aaa     -----gg   g      ---u     c    c 
   gaga   gguga       ggg aagugu    uagag cgau u
   ||||   |||||       ||| ||||||    ||||| ||||  
   CUCU   UCACU       CUc uucgca    auuuc gcua g
UCA    -GC     AAACACA   g      cugu     a    a 


Annotation confidence Not enough data
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Genome context
CM001460.1: 28454197-28454281 [-]

Database links

Mature oni-miR-10941

Accession MIMAT0043485
Description Oreochromis niloticus oni-miR-10941 mature miRNA
Sequence 63 - UCACACAAAUCACUCGUCUCACU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25199625
    Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
    Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
    BMC Genomics (2014) 15:774