miRBase entry: oni-mir-219d-2

Stem-loop oni-mir-219d-2

Accession

MI0035541

Description

Oreochromis niloticus oni-mir-219d-2 precursor miRNA

Sequence

agauguccaggcacaauucucggguuggauuugaaauuucacaAGAAUUGCGUUUGGACAAUCAGC
.(((((((((((.(((((((...((.(((........))))).))))))).)))))))).)))...

Structure

--a   -        a       cgg  u   uuu 
   gau guccaggc caauucu   gu gga   g
   ||| |||||||| |||||||   || |||    
   CUA CAGGUUUG GUUAAGA   ca cuu   a
CGA   A        C       --a  -   uaa

Annotation confidence Not enough data

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Genome context

CM001455.1: 29502991-29503056 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oni-mir-219d-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oni-miR-219d

Accession	MIMAT0043245
Description	Oreochromis niloticus oni-miR-219d mature miRNA
Sequence	44 - AGAAUUGCGUUUGGACAAUCAGC - 66
Evidence	experimental Illumina [1]

References

PubMed ID: 25199625
Identification of male-specific amh duplication, sexually differentially expressed genes and microRNAs at early embryonic development of Nile tilapia (Oreochromis niloticus)
Eshel O, Shirak A, Dor L, Band M, Zak T, Markovich-Gordon M, Chalifa-Caspi V, Feldmesser E, Weller JI, Seroussi E, Hulata G, Ron M
BMC Genomics (2014) 15:774